CDS
| Accession Number | TCMCG016C26032 |
| gbkey | CDS |
| Protein Id | OMO54826.1 |
| Location | join(38009..38024,38118..38394,39069..39482,39611..39746,39854..40153,40396..40612,40895..40998,41175..41321) |
| Organism | Corchorus capsularis |
| locus_tag | CCACVL1_27545 |
Protein
| Length | 536aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215142; BioSample:SAMN03290679; |
| db_source | AWWV01014872.1 |
| Definition | Pre-mRNA splicing Prp18-interacting factor [Corchorus capsularis] |
| Locus_tag | CCACVL1_27545 |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | pre-mRNA-splicing factor |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12819
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005681 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:1990904 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCTACCGCATCAGTGGCATTTAAATCGAGGGAGGATCACCGGAAACAGCTAGAATTAGAAGAAGCTCGAAAAGCAGGACTTGCGCCGGCTGAAGTCGATGAGGATGGAAAAGAGATTAACCCTCACATTCCTCAGTATATGTCATCAGCACCATGGTATCTCAATGCCGAAAGACCCAGTTTAAAGCATCAAAGGAAATGGAAGTCGGATCCAAATTACACCAAATCGTGGTATGATAGAGGTGCAAAGATCTTTCAGGCGGATAAGTATCGAAAGGGAGCCTGCGAAAACTGTGGAGCCATGACACATGATTCGAAGTCGTGCATGGAGAGGCCTCGTAAGAAGGGGGCAAAGTGGACAAGCATGCACATTGCACCTGATGAAAAGATAGAGACTTTTGAATTAGATTATGATGGTAAGCGGGATAGATGGAATGGTTTTGATCCATCTACCTATGCCCGTGTTATGGAAAGGTATGAGGCAAAAGAAGCGGCTAGAAAGAAGTATGTGAAAGAACAGCAGTTGAAAAAATTGGAGGAGAAAAATGGCAACGGCAATGGTGATGAAGAGGTCAGTGATGAAGAGGACGATGATGATGCCCTAAAGATTGATGAAGCTAAGGTCGATGAGAGCAAACAGATGGACTTTGCTAAGGTCGAGAAGCGTGTTCGTACTACTGGTGGAGGGAGCACGGGTACTGTAAGAAATCTGCGTATTCGGGAAGACACTGCCAAATATCTTTTGAATCTGGATGTGAATTCTGCATACTATGACCCCAAGACTCGATCTATGCGTGAAGATCCACTTCCGGATGCTGATCCAAATGAAAAGTTCTATGGAGGTGATAACCAATATAGAATGAGTGGGCAAGCTTTAGAGTTCAAGCAGCTGAATGTTCATGCATGGGAAGCATTTGATAAGGGTCAAGACATTCACATGCAAGCTGCTCCCTCTCAAGCTGAACTCCTTTTCAAGAATTTTAAGGTTAACAAAGAGAAATTGAGGACAAAGACCAAAGATACGATCATGGAGAAATATGGGAATGCAGCAACTGAAGAAGAGATACCAATGGAGCTTCTCCTAGGACAAAGTGAGAGGCAAGTCGAATATGATCGTGCTGGCAGAGTTATAAAAGGAATGGAAACATCCCTTCCAAAAAGTAAGTATGAAGAAGATGTTTTCATCAATAACCACACAACTGTTTGGGGTTCATGGTGGAATGATCACCAATGGGGATACAAGTGTTGTAAACAAACAATTCGGAATAGTTATTGTACTGGTGCGGCTGGTATTGAGGCTGCCGAAGCGGCAACAGACTTGATGAAGACTAACATTGCACGTAAAGCAGCCGCCGAAGATGCGCCCGCTCCTGCAGAGGAGAAAAAGCTTGCTACTTGGGGAACTGATGTTCCTGATGACCTGGTTCTTGATGAAAAACTTCTCACTGAGGCTCTTAAGAAGGAGGATGAGAGGAAGAGAGTGGAGAAGGATGAACGAAAACGCAAGTACAATGTTAGATGGAATGATGAGGTTACGGCTGAGGAGATGGAGGCATATCGGATGAAAAAGATACACCATGATGACCCCATGAAGGATTTCTTAAACTGA |
| Protein: MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKSCMERPRKKGAKWTSMHIAPDEKIETFELDYDGKRDRWNGFDPSTYARVMERYEAKEAARKKYVKEQQLKKLEEKNGNGNGDEEVSDEEDDDDALKIDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYGGDNQYRMSGQALEFKQLNVHAWEAFDKGQDIHMQAAPSQAELLFKNFKVNKEKLRTKTKDTIMEKYGNAATEEEIPMELLLGQSERQVEYDRAGRVIKGMETSLPKSKYEEDVFINNHTTVWGSWWNDHQWGYKCCKQTIRNSYCTGAAGIEAAEAATDLMKTNIARKAAAEDAPAPAEEKKLATWGTDVPDDLVLDEKLLTEALKKEDERKRVEKDERKRKYNVRWNDEVTAEEMEAYRMKKIHHDDPMKDFLN |